Soil 5515
Soil Genesis and Landscape Relations
Fall Semester, 2001
Ed Nater and Jay Bell, Instructors
The Biological Factor
Innumerable types of ecoystems exist, with the composition and dynamics of each particular ecosystem type depending on climate, soils, successional history, fire, human activity, and many other factors. Just as soils influence the ecosystems they are part of, so do various factors in those ecosystems influence the properties and development of the soils contained therein.
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| Wetland north of Sutter Buttes, Sacramento Valley, CA, USA. |
Meadow outside of Zion National Park, UT, USA |
Montane meadow, central Sierra Nevada mountains, CA, USA, at an elevation
of about 2200 m |
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 |
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| Open chapparal community, Santa Cruz Island, CA, USA. |
Fir and canyon maple, small canyon, Zion National Park, UT, USA. |
Grass-oak savanna, Anoka sand plain, MN, USA. |
What are major effects from vegetation?
- root uptake
- OM additions
- substrate for microbes
- physical effects (raindrop interception, erosion prevention, treethrow, ...)
From animals?
- burrowing
- horizon disruption
- compaction
Effects of Higher Plants:
Root Processes:
- water uptake (and release under certain limited circumstances)
- solute uptake - active transport and passive transport
- solute selectivity
- solute release - especially hydrogen
- organic ligand output - may aid in the release of some nutrient elements,
provides substrate for the growth of micro-organisms, involved in mineral
formation
- oxygen uptake - required for uptake of water. Can also have oxygen release
in rice, sedges, wild rice.
- carbon dioxide output - alters pH, involved in carbonate formation
- growth and its effects on soil aggregation
- physical binding of soil materials by root particles, especially in grasslands
- physical weathering of rocks
- chemical weathering of rocks
Additions of Organic Matter
quantity - amount deposited over a period of time
quality
- chemistry - types of compounds present: lignin, protein, cellulose, etc.
- biodegradability - C:N ratios, types of constituents present
where added - soil surface, uppermost few inches, throughout the solum
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 |
| Soil formed under prairie vegetation |
Soil formed under mixed coniferous/deciduous forest vegetation |
seasonal distribution of additions - continuous, annual, longer cycles
effects of organic materials (sloughed root materials, excreted organic
acids) released in the rhizosphere
- effects on microbes
- degradation of minerals
- pH effects
Other Plant Effects
- protection from erosion
- interception of raindrop impact energy
- physical binding of soil aggregates
- slowing of downslope flow
- stemflow-throughfall effects - redistribution of energy and matter
| |
Throughfall |
Stemflow |
Throughfall |
Stemflow |
Throughfall |
Stemflow |
| |
mm |
mm |
g OC m-2 yr-1 |
g OC m-2 yr-1 |
µg Hg m-2 yr-1 |
µg Hg m-2 yr-1 |
| Open Air Precip |
677 |
-- |
1.21 |
-- |
5.70 |
-- |
| Black Spruce |
604 |
0.5 |
8.39 |
0.08 |
17.96 |
0.05 |
| Aspen |
572 |
16.3 |
6.81 |
0.81 |
7.63 |
0.83 |
| Balsam Fir |
575 |
14.0 |
14.01 |
0.53 |
17.57 |
0.98 |
- biological nutrient cycling and leaf leaching - species differences
- capture of aerosol dusts (dryfall) - often a function of plant leaf surface
area
- tree tip pedoturbation - from windthrow of trees. The roots carry the soil
with them, creating a hole and a small mound.
- interaction with macroclimate to create microclimate
Effects of Microbial Organisms
Organisms involved
- fungi
- actinomycetes
- bacteria
- algae
- diatoms
- microfauna
Ecological distribution: see table 1.
Table 1. Range of biomasses in terrestrial ecosystems (from Ugolini and
Edmonds, 1983).
| Ecosystem type |
Fungi |
Bacteria |
Microfauna |
| |
(kg / ha) |
(kg / ha) |
(kg / ha) |
| Tundra |
20 - 80 |
3 - 9 |
8 - 36 |
| Desert |
135 |
4 |
7 |
| Grassland |
4000 |
3000 |
226 |
| Temperate deciduous forest |
890 - 1290 |
1 - 265 |
83 - 786 |
| Coniferous forest |
836 - 4620 |
1 - 110 |
84 - 786 |
| Subtropical and tropical broadleaf forest |
4500 |
1100 |
84 |
Related to:
- type of organic matter
- moisture content
- temperature
- aeration
- pH
- differences in function - materials decomposed
Decomposition of Organic Materials
- reduction in bulk, production of organic matter
- production of decomposition products - gums, waxes, humic and fulvic acids,
soluble acids, others
- release of carbon dioxide
- release of organically-bound nutrients - examples from a bog, a mineral
soil
Other Microbial Effects
- Lowering of redox potential
 |
Lowering of redox potential:
reduction, solubilization, and mobilization of Fe, Mn
formation of mottles, gleyed horizons, iron pans, concretions
reduction of sulfates and nitrates
formation of sulfides
emission of hydrogen sulfide, methane, reduced nitrate forms |
| Heavily mottled soil horizon. |
|
- physical binding of soil particles by fungal filaments
- chemical weathering of rocks
Effects of Animals
- Biopedoturbation - the mixing of soil materials by biological means. Worms
are particularly effective, but invertebrates to elephants can mix soil
horizons.
 |
 |
| Filled insect burrow (possibly a cicada-like insect) in paleosol horizon,
eastern Washington state, USA. |
Paleosol horizon composed mainly of numerous filled insect burrows
similar to the one in the picture to the left. This particular morphological
feature is an excellent indicator of buried paleosols in this region of
eastern Washington state, USA. |
- consumption and decomposition of organic materials - especially by earthworms
- redistribution of elements, organic matter, materials, seeds - through
biopedoturbation, grazing and herd movements, others
- formation of macropores and animal burrows (crotovina) - affects drainage,
oxidation, moves material
 |
 |
| Ant mound from central Wyoming. Approximately 0.3 m tall, 1 m diameter.
Numerous mounds were observed in this area. |
The large sloping dark mass in the right center of the image is a filled-in
crotovina, probably from a mouse or other small rodent. Note its effects
on the movement of water and subsequent leaching/staining of the horizon
beneath. |
compaction - affects aeration and water movement, seed emergence
earthworms - a special case - important in:
- redistribution of organic matter
- formation of macropores
- formation of soil structure
- ants and termites perform many of these functions in tropical and arid
soils
Effects of Humans (does this represent an organism factor?)
- pedoturbation - plowing, mixing of soil materials, increased organic matter
oxidation
- compaction - agriculture, road building, but also walking trails
- alteration of vegetation - mainly by agriculture, but also through the
introduction of pests, invasive species, and diseases; promotion of fires
and control of fires
 |
| Many savanna areas are maintained by fire, sometimes managed by local
human populations; alteration of the fire regime often allows other plant
communities to invade and become established. Controlled burn site, Cedar
Creek Natural History Area near East Bethel, MN, USA. |
- drainage - increases oxidation of organic matter, may lead to oxidation
of sulfides and potentially drastic lowering of pH
- land-leveling - removal of surface soil in one area and addition in another,
alteration of natural drainage channels
- irrigation - leaching of salts, additions of salts, dispersion of soil
- fertilization - addition of nutrients, alteration of pH
- crop removal - loss of nutrients, change in pH, loss of organic matter
inputs
- accelerated erosion
- devastation - mining, construction, dredging, others
- Anthrosols - a special case - earliest - plaggen epipedons, shell mounds,
middens, etc.
 |
| Soil developed in a shell mound or midden, Santa Cruz Island, CA, USA.
White coarse fragments are shell fragments; black soil material between
is enriched in organic matter derived from food residues and other human
refuse. |
Integration of Effects: Grassland and Forest Soils in the Midwest
Jenny's model:
s = f(cl, o, r, p, t, ...)
In order to "solve" this function for one factor, all other factors
must remain constant. This situation is called a "biofunction". Finding
such sites may be difficult if not impossible, but we may approximate this
condition in some places.
Can we find a case where this is true for vegetation?
Let's examine soils from the prairie - forest boundary in western Minnesota.
They have:
- very similar glacial till parent materials
- formed over the same time period
- essentially the same topography and relief (more or less)
- the same macroclimate. The different structures of these two communities
provides different microclimates, but this may be considered to be a part
of, or at least caused by, the biofactor
Consequently, at least for the purposes of our discussion, we may assume
that only the biological factor is different and that all other factors
have remained more or less constant.
A comparison of some morphological features and chemical properties
is given below:
Table 2. Comparison of properties between prairie and forest soils.
(Please note that these are general trends that are not true in all cases.)
| |
Prairie Soils |
Forest Soils |
| O Horizon |
Thin, if present |
Thick to thin, composed of leaf litter |
| A Horizon |
Thick, dark, high base saturation |
Thin, light in color (if present), lower base saturation |
| E Horizon |
Generally absent; sometimes present, particularly in sodic soils |
Generally present. Lighter in color, lower in clay content |
| B Horizon |
Generally a cambic B or absent; argillics uncommon |
Displays accumulation of clays or Fe and Al sesquioxides if soil is
sufficiently well-developed |
| Clay Content |
Generally even throughout. May display some evidence of lessivage,
but usually minimal |
Highest in B horizon, which generally becomes argillic if sufficiently
developed. Lower in A and E horizons |
| pH |
Neutral or slightly acid |
Neutral to moderately acid. May be very acid under coniferous vegetation |
| Organic Matter Content of A Horizon |
Generally higher content, distributed to greater depth |
Generally lower content; mainly present at the surface in the O and
thin A horizons |
What factors have produced differences in these soils?
What specific interactions have influenced the development of these
soils?
Further Reading
Ugolini, F. C., and R. L. Edmonds, 1983. Soil Biology. Chapter 7, pp. 193
- 231. In: Wilding, L. P., N. E. Smeck, and G. F. Hall (eds.) Pedogenesis
and Soil Taxonomy: I. Concepts and Interactions. Elsevier, New York.
Copyright: Regents of the University of Minnesota
Creator: Ed Nater
Department of Soil, Water, and Climate
The opinions expressed herein are those of the authors and do not necessarily
represent those of the University of Minnesota or its Regents.